Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015864215.1_cds_XP_016515915.1_28210
CDS Infomation

[gene=LOC107832568] [db_xref=GeneID:107832568] [protein=polyamine oxidase 1 isoform X1] [protein_id=XP_016515915.1] [location=join(21054..21105,21214..21463,21669..21791,21903..21964,22095..22249,23271..23414,25028..25177,26367..26621,26953..27034,27126..27340)] [gbkey=CDS]
Sequence

ATGGCAACTCCCCGTCGCTGCTCTGTCGTCATAGTCGGAGCCGGCATCTCAGGTTTAACG
GCGGCGAAGGTGTTATCGGAGAATGGGGTGGATGATGTGATGATATTGGAAGCGTCTGAT
AAGATAGGTGGCAGGATAAGGAAGGAGGAATTCGGCGGAGTTACGGTGGAACTCGGCGCC
GGTTGGATCGCCGGCGTCGGTGGTAAACAGTCTAATCCTGTATGGGAACTTGCCCTTCAG
TCTAATCTCCGTACTTGCTTCTCTGATTACAGTAATGCCCGTTACAATATCTATGATCCC
AGTGGGAAGATATTTCCGAGTGGAATAGCGGCAGACTCGTATAAGAAAGCGGTGGACTCG
GCAATTCAGAAACTCAGAAGCCAAGAAGGAAACAATAACCATGAATCTTTTGCTGAAACG
ACGTCTACTCCAAAAACACCAATAGAGCTGGCGATTGACTTCATTCTCCATGATTTTGAA
ATGGCAGAGGTTGAGCCAATATCAACATATGTGGATTTTGGAGAAAGAGAATTTCTAGTT
GCTGATGAAAGAGGGTATGAGCATTTGCTTTATAAAATGGCAGAAAACTTTCTTTTTACC
TCTGAGGGTAAAATTACGGACAGCCGTCTCGAGCTCAACACGGTTGTTCGGGAAGTGCAG
CACTCGAGAAACGGCGTATTGGTGTCAACAGAAGATGGTTCCCTTTACGAAGCCAATTAC
GTGATTTTGTCTGTTAGCATTGGTGTTCTCCAAAGCGACCTCATTTCCTTCACACCCCCT
TTACCTAGATGGAAGATGGAAGCTATCCGAAACTTGGATGTGATGGTTTATACAAAGATC
TTTCTCAAATTTCCTTACAAGTTTTGGCCTTGTGAACCTGAGAAGGAGTTCTTCATCTAC
GCCCACGAGCGAAGAGGCTACTATACTTTTTGGCAGCACATGGAGAATGCTTACCCGGGC
TCCAATATTCTGGTGGTAACCTTGACAAATGGTGAGTCGAAACGAGTGGAATCTCAATCC
GATCAAGAAACATTAAGAGAAGCAATGCAAGTGCTAAGAAACATGTTTGGGCCTGACATT
CCCGATGCCACCGACATTTTAGTCCCACGTTGGTGGAATAATCGGTTTCAGCGTGGCAGC
TACAGTAATTACCCCATATATGTAAATCATCAACTCGTCCATGATATTAAGGAACCAGTG
GGGCGGATATTTTTCACAGGCGAGCACACAAGTGAAAAATTTAGTGGCTATGTTCATGGA
GGTTACCTTTCAGGTATAGACACCACAAATGCATTACTTGAAGAAATGAGAAAGGATGAT
GGAAGGAAGAATGAGAGTCAAGCTTTTCTGTTAGAACCATTGCTAGCATTAACCGGATCT
TTGACATTGACACAAGCTGAGACCGTCTCAAGCCTCCACAAATGTGATATTCCGCGACAA
CTCTTCCTTAGTAACAGCAAATTGGGACTTCCAGAGGCTATCTTATGA

Peptide Sequence

PEP ID

XP_016515915.1
PEP Infomation

PREDICTED: polyamine oxidase 1 isoform X1 [Nicotiana tabacum]
Sequence

MATPRRCSVVIVGAGISGLTAAKVLSENGVDDVMILEASDKIGGRIRKEEFGGVTVELGA
GWIAGVGGKQSNPVWELALQSNLRTCFSDYSNARYNIYDPSGKIFPSGIAADSYKKAVDS
AIQKLRSQEGNNNHESFAETTSTPKTPIELAIDFILHDFEMAEVEPISTYVDFGEREFLV
ADERGYEHLLYKMAENFLFTSEGKITDSRLELNTVVREVQHSRNGVLVSTEDGSLYEANY
VILSVSIGVLQSDLISFTPPLPRWKMEAIRNLDVMVYTKIFLKFPYKFWPCEPEKEFFIY
AHERRGYYTFWQHMENAYPGSNILVVTLTNGESKRVESQSDQETLREAMQVLRNMFGPDI
PDATDILVPRWWNNRFQRGSYSNYPIYVNHQLVHDIKEPVGRIFFTGEHTSEKFSGYVHG
GYLSGIDTTNALLEEMRKDDGRKNESQAFLLEPLLALTGSLTLTQAETVSSLHKCDIPRQ
LFLSNSKLGLPEAIL

Transcript Sequence

Gene sequence data has not been registered.